miRNA display CGI


Results 21 - 29 of 29 are showing below:
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GenBank Identifier RefSeq Acc. Name
20564155 NC_003840.1 Tomato ringspot virus RNA 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15271 + 4191 87 22.5 -24.2 NP_620765 5' arm      3' arm
15272 + 4511 84 19.5 -20.93 NP_620765 5' arm      3' arm
15273 + 4629 87 23 -22.3 NP_620765 5' arm      3' arm
15274 + 6223 90 23 -22 NP_620765 5' arm      3' arm
15275 - 293 89 20.5 -22.1 NP_620765 5' arm      3' arm
15276 - 591 85 20.5 -24.8 NP_620765 5' arm      3' arm
15277 - 741 89 22 -29.6 NP_620765 5' arm      3' arm
15278 - 870 81 20 -23.3 NP_620765 5' arm      3' arm
15279 - 3096 87 25 -27.4 NP_620765 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.