miRNA display CGI


Results 1 - 17 of 17 are showing below:
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GenBank Identifier RefSeq Acc. Name
34610110 NC_005096.1 Tobacco ringspot virus RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22776 + 3106 86 21 -26.3 NP_919039 5' arm      3' arm
22777 + 3555 90 20.5 -22.9 5' arm      3' arm
22778 - 1742 89 24 -22.11 NP_919039 5' arm      3' arm
22779 + 97 90 24 -24.4 NP_919040 5' arm      3' arm
22780 + 201 90 19 -22.6 NP_919040 5' arm      3' arm
22781 + 378 79 19.5 -26.7 NP_919040 5' arm      3' arm
22782 + 470 89 20 -23.31 NP_919040 5' arm      3' arm
22783 + 812 85 20.5 -20 NP_919040 5' arm      3' arm
22784 + 1137 90 25 -24.2 NP_919040 5' arm      3' arm
22785 + 2208 82 19 -28.4 NP_919040 5' arm      3' arm
22786 + 5273 90 24.5 -23.3 NP_919040 5' arm      3' arm
22787 + 6161 90 24 -24.1 NP_919040 5' arm      3' arm
22788 + 7140 90 22 -22.9 5' arm      3' arm
22789 - 304 84 19 -21.1 NP_919040 5' arm      3' arm
22790 - 462 90 21.5 -24.5 NP_919040 5' arm      3' arm
22791 - 2895 90 25.5 -22.1 NP_919040 5' arm      3' arm
22792 - 6538 90 20.5 -24.9 NP_919040 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.