miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
51014188 NC_001411.2 Black beetle virus RNA 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2306 + 442 85 19.5 -20.3 YP_053043 5' arm      3' arm
2307 - 3053 86 23 -28.1 YP_057021 5' arm      3' arm
8291 + 159 89 23.5 -24.2 NP_049329 5' arm      3' arm
8292 + 809 89 21.5 -25.34 NP_049329 5' arm      3' arm
8293 - 898 90 20 -24.5 NP_049329 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.