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GenBank Identifier | RefSeq Acc. | Name |
9626931 | NC_002026.1 | Brome mosaic virus RNA 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
8265 | + | 680 | 88 | 21 | -21.4 | NP_041196 | 5' arm 3' arm | ||
8266 | + | 1081 | 90 | 23.5 | -19.49 | NP_041196 | 5' arm 3' arm | ||
8267 | + | 3085 | 89 | 22 | -22.2 | 5' arm 3' arm | |||
8268 | + | 253 | 90 | 25.5 | -27.9 | NP_041197 | 5' arm 3' arm | ||
8269 | + | 531 | 87 | 23.5 | -25.1 | NP_041198 | 5' arm 3' arm | ||
8270 | + | 1447 | 88 | 25 | -31.3 | NP_041199 | 5' arm 3' arm | ||
8271 | - | 1376 | 89 | 20 | -22 | NP_041199 | 5' arm 3' arm | ||
8272 | - | 1902 | 84 | 21 | -25.5 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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