miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
20087039 NC_003541.1 Cowpea chlorotic mottle virus RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14770 + 418 88 24.5 -22.7 NP_613275 5' arm      3' arm
14771 + 1194 89 20 -20.9 5' arm      3' arm
14772 + 1559 89 20.5 -23.5 NP_613277 5' arm      3' arm
14773 + 1704 89 21.5 -22.9 NP_613277 5' arm      3' arm
14774 + 2080 90 19.5 -29.6 5' arm      3' arm
14775 - 1124 90 19.5 -20.1 NP_613276 5' arm      3' arm
14776 - 2169 90 19 -25 5' arm      3' arm
14777 + 240 88 21 -20.2 NP_613278 5' arm      3' arm
14778 + 423 90 25.5 -23.2 NP_613278 5' arm      3' arm
14779 + 589 88 21.5 -21 NP_613278 5' arm      3' arm
14780 + 3078 90 20 -20.3 5' arm      3' arm
14781 - 362 82 21.5 -23.5 NP_613278 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.