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GenBank Identifier | RefSeq Acc. | Name |
20564157 | NC_003836.1 | Tomato aspermy virus RNA 3 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15246 | + | 161 | 90 | 21 | -22.94 | NP_620758 | 5' arm 3' arm | ||
15247 | + | 2239 | 89 | 19 | -20.3 | 5' arm 3' arm | |||
15248 | + | 976 | 90 | 22.5 | -21.9 | NP_620760 | 5' arm 3' arm | ||
15249 | + | 3243 | 90 | 21.5 | -21 | 5' arm 3' arm | |||
15250 | + | 2926 | 89 | 19 | -20.3 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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