miRNA display CGI


Results 1 - 20 of 45 are showing below:
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GenBank Identifier RefSeq Acc. Name
41057352 NC_005340.1 Bacteriophage PSP3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
25994 + 24762 89 19 -20.2 NP_958088 5' arm      3' arm
25995 + 26023 87 19 -20 NP_958091 5' arm      3' arm
25982 + 9218 88 19 -23.3 NP_958069 5' arm      3' arm
26016 - 21695 90 19 -25.5 5' arm      3' arm
26018 - 28256 90 19 -20 NP_958093 5' arm      3' arm
25974 + 175 86 19 -19.5 NP_958056 5' arm      3' arm
26010 - 15125 90 19 -19.62 NP_958076 5' arm      3' arm
25977 + 2796 90 19.5 -24.36 NP_958058 5' arm      3' arm
26011 - 15664 86 19.5 -22.9 NP_958076 5' arm      3' arm
25983 + 9954 90 19.5 -25.3 NP_958070 5' arm      3' arm
25993 + 20591 90 19.5 -19.4 NP_958082 5' arm      3' arm
26000 - 1274 90 19.5 -20.5 NP_958057 5' arm      3' arm
25989 + 16784 90 20 -23.1 NP_958079 5' arm      3' arm
25987 + 15264 82 20 -20.9 NP_958076 5' arm      3' arm
26008 - 11496 89 20 -24.6 NP_958072 5' arm      3' arm
26004 - 4558 89 20 -21.8 NP_958059 5' arm      3' arm
25976 + 2500 90 20 -23.01 NP_958058 5' arm      3' arm
26006 - 9116 87 20 -24.1 NP_958068 5' arm      3' arm
26003 - 3909 89 20.5 -27.6 5' arm      3' arm
25979 + 3542 85 20.5 -22.4 NP_958058 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.