miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
13277517 NC_001653.2 Hepatitis D virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
4072 + 749 90 19.5 -24.2 5' arm      3' arm
4073 + 1009 89 20 -23.9 NP_077804 5' arm      3' arm
4074 + 1601 82 19 -23.3 NP_597693 5' arm      3' arm
4075 - 838 90 22.5 -30.3 5' arm      3' arm
4076 - 1165 87 21 -35.2 NP_077804 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.