miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20153346 NC_003601.1 Leishmania RNA virus 1-4

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14798 + 144 88 22 -19.4 5' arm      3' arm
14799 + 238 89 21 -19.5 5' arm      3' arm
14800 + 1095 88 23 -24.8 NP_619652 5' arm      3' arm
14801 - 631 88 21 -20 NP_619652 5' arm      3' arm
14802 - 1183 90 19.5 -20.7 NP_619652 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.