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GenBank Identifier | RefSeq Acc. | Name |
33589253 | NC_005062.1 | Omsk hemorrhagic fever virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22446 | + | 2288 | 87 | 24.5 | -27.6 | NP_878909 | 5' arm 3' arm | ||
22447 | + | 2690 | 90 | 19.5 | -20.3 | NP_878909 | 5' arm 3' arm | ||
22448 | + | 3704 | 90 | 19.5 | -22.7 | NP_878909 | 5' arm 3' arm | ||
22449 | + | 4055 | 90 | 21 | -20 | NP_878909 | 5' arm 3' arm | ||
22450 | + | 4663 | 84 | 23.5 | -21.4 | NP_878909 | 5' arm 3' arm | ||
22451 | + | 6058 | 84 | 20.5 | -24.74 | NP_878909 | 5' arm 3' arm | ||
22452 | + | 6439 | 90 | 20 | -30.8 | NP_878909 | 5' arm 3' arm | ||
22453 | + | 6878 | 90 | 19.5 | -20.8 | NP_878909 | 5' arm 3' arm | ||
22454 | + | 7889 | 88 | 20 | -28.4 | NP_878909 | 5' arm 3' arm | ||
22455 | + | 9050 | 90 | 19.5 | -20.6 | NP_878909 | 5' arm 3' arm | ||
22456 | + | 9828 | 87 | 21 | -22.3 | NP_878909 | 5' arm 3' arm | ||
22457 | + | 10701 | 87 | 19 | -22.9 | 5' arm 3' arm | |||
22458 | - | 1985 | 90 | 21 | -20.9 | NP_878909 | 5' arm 3' arm | ||
22459 | - | 5630 | 89 | 19.5 | -21.8 | NP_878909 | 5' arm 3' arm | ||
22460 | - | 10786 | 85 | 20.5 | -26.81 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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