miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
3594	+	18711	77	21	-20.3			5' arm      3' arm
3595	+	18828	88	21.5	-20.2	NP_042598		5' arm      3' arm
3596	+	21394	90	20	-23.1	NP_042600		5' arm      3' arm
3597	+	21538	90	20.5	-26.5	NP_042600		5' arm      3' arm
3598	+	21745	88	19.5	-30.5	NP_042600		5' arm      3' arm
3599	+	22604	86	22	-27.6	NP_042600		5' arm      3' arm
3600	+	22953	90	19	-22.2	NP_042600		5' arm      3' arm
3601	+	23677	84	20.5	-19.7	NP_042600		5' arm      3' arm
3602	+	23774	90	22.5	-23.3	NP_042600		5' arm      3' arm
3603	+	24222	82	19	-20.5	NP_042600		5' arm      3' arm
3604	+	24617	85	19.5	-24.8	NP_042600		5' arm      3' arm
3605	+	24738	89	22	-21.2	NP_042600		5' arm      3' arm
3606	+	25042	84	22	-34	NP_042600		5' arm      3' arm
3607	+	25649	90	19	-22.9	NP_042601		5' arm      3' arm
3608	+	26883	88	19	-24.8	NP_042602		5' arm      3' arm
3609	+	27023	86	19	-21	NP_042602		5' arm      3' arm
3610	+	28473	90	21.5	-19.9	NP_042602		5' arm      3' arm
3611	+	29575	90	21	-20.5	NP_042602		5' arm      3' arm
3612	+	30984	88	21	-22.21	NP_042603		5' arm      3' arm
3613	+	31491	90	20.5	-19.6	NP_042603		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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