miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9635478 NC_002363.1 Bacteriophage VfO4K68

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8761 - 5180 85 21.5 -20.7 5' arm      3' arm
8757 + 1310 88 21.5 -21 NP_059544 5' arm      3' arm
8758 + 4681 89 20 -25.3 NP_059547 5' arm      3' arm
8759 - 4689 90 20 -29.2 NP_059547 5' arm      3' arm
8760 - 5075 87 21 -30.1 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.