miRNA display CGI


Results 1 - 15 of 15 are showing below:
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GenBank Identifier RefSeq Acc. Name
38112181 NC_005155.1 Grass carp reovirus segment 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22992 + 1709 87 24.5 -22.44 NP_937996 5' arm      3' arm
22993 + 3459 89 20 -23.22 NP_937996 5' arm      3' arm
23000 + 1109 89 19.5 -25.7 NP_937999 5' arm      3' arm
22991 + 1182 86 19.5 -21.1 NP_937985 5' arm      3' arm
23004 - 936 85 22.5 -25.4 NP_938003 5' arm      3' arm
23003 - 1327 90 19 -20.8 NP_938001 5' arm      3' arm
23001 - 574 87 21.5 -20.8 NP_938001 5' arm      3' arm
23002 - 749 88 23 -24.3 NP_938001 5' arm      3' arm
22999 - 3502 89 19 -25.9 NP_937997 5' arm      3' arm
22996 - 325 90 20 -26.8 NP_937997 5' arm      3' arm
22997 - 2113 88 21 -26.6 NP_937997 5' arm      3' arm
22998 - 2250 87 23.5 -26.4 NP_937997 5' arm      3' arm
22995 - 207 90 24.5 -22 NP_937997 5' arm      3' arm
22994 - 393 89 21.5 -22.2 NP_938029 5' arm      3' arm
23005 - 676 89 22 -31.5 NP_938006 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.