miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
11125722 NC_002604.1 Botrytis virus F

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
9818 - 2478 86 19 -21.7 NP_068549 5' arm      3' arm
9819 - 4159 90 22.5 -21.3 NP_068549 5' arm      3' arm
9820 - 5944 89 22.5 -24.7 NP_068550 5' arm      3' arm
9821 - 6183 85 20 -19.87 NP_068550 5' arm      3' arm
9822 - 6663 87 26 -25.8 NP_068550 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.