miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30292	-	16346	87	20.5	-32.7	YP_094037		5' arm      3' arm
30291	-	15113	88	22.5	-28.5			5' arm      3' arm
30289	+	27898	89	21	-27.6	YP_094049		5' arm      3' arm
30286	+	17529	90	20	-27	YP_094039		5' arm      3' arm
30279	+	961	88	23	-26.8			5' arm      3' arm
30305	-	33644	88	23	-26.8			5' arm      3' arm
30281	+	6482	89	21	-26.1	YP_094032		5' arm      3' arm
30304	-	27043	89	23	-25.5	YP_094047		5' arm      3' arm
30302	-	25284	90	23.5	-25.3	YP_094045		5' arm      3' arm
30301	-	24362	90	19.5	-24.5	YP_094044		5' arm      3' arm
30295	-	18040	90	22.5	-23.5	YP_094039		5' arm      3' arm
30285	+	15451	87	20	-23.4	YP_094037		5' arm      3' arm
30303	-	26543	85	22.5	-23.3	YP_094047		5' arm      3' arm
30297	-	21756	89	20	-22.7	YP_094041		5' arm      3' arm
30283	+	7189	89	20	-22.7	YP_094032		5' arm      3' arm
30282	+	6717	90	19.5	-22.6	YP_094032		5' arm      3' arm
30287	+	22073	88	20	-22.2	YP_094041		5' arm      3' arm
30300	-	23987	90	23.5	-22	YP_094042		5' arm      3' arm
30296	-	18362	89	20.5	-21.6	YP_094039		5' arm      3' arm
30280	+	3839	90	22	-21.2	YP_094030		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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