miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11908	-	33449	89	21.5	-22	YP_068050		5' arm      3' arm
11906	-	31090	90	19.5	-21.5	YP_068046		5' arm      3' arm
11907	-	31187	90	20.5	-26.3	YP_068046		5' arm      3' arm
11905	-	30868	90	19	-19.8	YP_068045		5' arm      3' arm
11904	-	29908	89	22.5	-20.5	YP_068043		5' arm      3' arm
11870	+	28999	90	25.5	-22.7	YP_068042		5' arm      3' arm
11903	-	27522	87	20.5	-27.2	YP_068040		5' arm      3' arm
11869	+	27092	86	19	-19.5	YP_068039		5' arm      3' arm
11902	-	26493	90	21.5	-23.2	YP_068038		5' arm      3' arm
11867	+	24318	87	20	-32.2	YP_068035		5' arm      3' arm
11868	+	25423	86	19.5	-20.2	YP_068035		5' arm      3' arm
11901	-	25509	88	22	-19.83	YP_068035		5' arm      3' arm
11900	-	25074	83	20	-26.8	YP_068035		5' arm      3' arm
11863	+	22147	90	20.5	-20.9	YP_068034		5' arm      3' arm
11899	-	22642	89	20	-25.1	YP_068034		5' arm      3' arm
11898	-	22414	90	19	-22.1	YP_068034		5' arm      3' arm
11865	+	23029	89	22.5	-19.5	YP_068034		5' arm      3' arm
11866	+	23224	84	19	-22.2	YP_068034		5' arm      3' arm
11864	+	22325	90	19.5	-22.5	YP_068034		5' arm      3' arm
11862	+	21060	82	19.5	-24	YP_068033		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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