miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11843	+	595	72	21	-19.4	YP_068018		5' arm      3' arm
11860	+	13791	90	23	-19.4	YP_068027		5' arm      3' arm
11869	+	27092	86	19	-19.5	YP_068039		5' arm      3' arm
11865	+	23029	89	22.5	-19.5	YP_068034		5' arm      3' arm
11893	-	19756	90	22	-19.5	YP_068032		5' arm      3' arm
11881	-	12092	90	21.5	-19.8	YP_068026		5' arm      3' arm
11905	-	30868	90	19	-19.8	YP_068045		5' arm      3' arm
11901	-	25509	88	22	-19.83	YP_068035		5' arm      3' arm
11855	+	9386	89	19.5	-20.1	YP_068024		5' arm      3' arm
11894	-	19871	88	21.5	-20.1	YP_068032		5' arm      3' arm
11868	+	25423	86	19.5	-20.2	YP_068035		5' arm      3' arm
11889	-	15398	90	20	-20.3	YP_068027		5' arm      3' arm
11885	-	13290	90	19	-20.4	YP_068026		5' arm      3' arm
11883	-	12481	86	20.5	-20.5	YP_068026		5' arm      3' arm
11904	-	29908	89	22.5	-20.5	YP_068043		5' arm      3' arm
11879	-	11053	90	19.5	-20.6	YP_068025		5' arm      3' arm
11882	-	12311	89	22.5	-20.6	YP_068026		5' arm      3' arm
11878	-	9862	89	22.5	-20.6	YP_068024		5' arm      3' arm
11858	+	13325	90	22.5	-20.9	YP_068026		5' arm      3' arm
11863	+	22147	90	20.5	-20.9	YP_068034		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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