miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11863	+	22147	90	20.5	-20.9	YP_068034		5' arm      3' arm
11864	+	22325	90	19.5	-22.5	YP_068034		5' arm      3' arm
11865	+	23029	89	22.5	-19.5	YP_068034		5' arm      3' arm
11866	+	23224	84	19	-22.2	YP_068034		5' arm      3' arm
11867	+	24318	87	20	-32.2	YP_068035		5' arm      3' arm
11868	+	25423	86	19.5	-20.2	YP_068035		5' arm      3' arm
11869	+	27092	86	19	-19.5	YP_068039		5' arm      3' arm
11870	+	28999	90	25.5	-22.7	YP_068042		5' arm      3' arm
11871	-	567	88	20.5	-27.3			5' arm      3' arm
11872	-	1048	89	21.5	-24.9	YP_068018		5' arm      3' arm
11873	-	2087	90	19	-22.3	YP_068019		5' arm      3' arm
11874	-	5704	87	21	-25.4	YP_068023		5' arm      3' arm
11875	-	5818	84	19.5	-26.1	YP_068023		5' arm      3' arm
11876	-	8795	90	20.5	-25.6	YP_068024		5' arm      3' arm
11877	-	8914	90	20	-23	YP_068024		5' arm      3' arm
11878	-	9862	89	22.5	-20.6	YP_068024		5' arm      3' arm
11879	-	11053	90	19.5	-20.6	YP_068025		5' arm      3' arm
11880	-	11502	72	20	-25.6	YP_068025		5' arm      3' arm
11881	-	12092	90	21.5	-19.8	YP_068026		5' arm      3' arm
11882	-	12311	89	22.5	-20.6	YP_068026		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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