miRNA display CGI


Results 1 - 16 of 16 are showing below:
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GenBank Identifier RefSeq Acc. Name
9629466 NC_001813.1 Duck adenovirus A

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
6043 + 26757 85 23 -20.1 5' arm      3' arm
6033 + 768 90 28 -23.3 NP_044698 5' arm      3' arm
6034 + 1016 88 24.5 -21.3 NP_044698 5' arm      3' arm
6032 + 268 90 21.5 -32 NP_044698 5' arm      3' arm
6035 + 4087 90 21 -25.2 NP_044702 5' arm      3' arm
6036 + 7148 89 21.5 -21.9 NP_044702 5' arm      3' arm
6037 + 8342 77 20 -20.4 NP_044703 5' arm      3' arm
6038 + 11263 88 21 -23.1 NP_044705 5' arm      3' arm
6039 + 13791 89 21.5 -22.5 NP_044708 5' arm      3' arm
6040 + 14010 82 20 -20.8 NP_044709 5' arm      3' arm
6047 - 14446 88 22.5 -22.7 NP_044709 5' arm      3' arm
6041 + 16339 87 23.5 -29.6 NP_044710 5' arm      3' arm
6042 + 19303 90 23 -22.9 NP_044713 5' arm      3' arm
6044 + 28322 84 21.5 -23.8 NP_044720 5' arm      3' arm
6045 + 28537 90 21.5 -27.4 NP_044720 5' arm      3' arm
6046 + 30221 89 20 -21.4 NP_044723 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.