miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27404	+	723	87	19	-21.4	YP_009196		5' arm      3' arm
27405	+	1342	80	24	-19.8			5' arm      3' arm
27406	+	2380	86	19.5	-19.8	YP_009198		5' arm      3' arm
27407	+	2473	87	20	-21.8	YP_009198		5' arm      3' arm
27408	+	3267	89	20.5	-22.1			5' arm      3' arm
27409	+	3513	89	21	-23.8	YP_009199		5' arm      3' arm
27410	+	4560	89	23	-20.8	YP_009200		5' arm      3' arm
27411	+	4702	90	21.5	-29	YP_009200		5' arm      3' arm
27412	+	5506	90	21.5	-24.7	YP_009201		5' arm      3' arm
27413	+	5636	89	24.5	-24.1	YP_009201		5' arm      3' arm
27414	+	5879	90	20.5	-28.3	YP_009201		5' arm      3' arm
27415	+	6140	89	20.5	-20	YP_009201		5' arm      3' arm
27416	+	7047	88	23.5	-24.7	YP_009201		5' arm      3' arm
27417	+	7308	90	19	-21.41	YP_009201		5' arm      3' arm
27418	+	8101	90	23	-29	YP_009201		5' arm      3' arm
27419	+	8263	89	24.5	-33.1	YP_009201		5' arm      3' arm
27420	+	9322	90	21.5	-26.4	YP_009202		5' arm      3' arm
27421	+	9513	89	20.5	-19.9	YP_009202		5' arm      3' arm
27422	+	9630	90	20	-22	YP_009202		5' arm      3' arm
27423	+	11247	89	20	-19.8	YP_009203		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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