miRNA display CGI


Results 1 - 20 of 90 are showing below:
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GenBank Identifier RefSeq Acc. Name
15320794 NC_003084.1 Culex nigripalpus baculovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11335 + 49199 89 28.5 -35.6 5' arm      3' arm
11386 - 68649 89 24.5 -35.6 5' arm      3' arm
11331 + 43939 89 20.5 -33.4 NP_203360 5' arm      3' arm
11336 + 49369 89 25.5 -32.9 5' arm      3' arm
11350 + 91153 90 21 -32.1 NP_203396 5' arm      3' arm
11373 - 49540 89 22 -30 5' arm      3' arm
11325 + 37852 89 19.5 -29.41 5' arm      3' arm
11326 + 39653 85 19.5 -28.3 NP_203351 5' arm      3' arm
11342 + 67656 87 21 -27.61 NP_203380 5' arm      3' arm
11366 - 17675 90 24 -27.6 NP_203326 5' arm      3' arm
11317 + 17507 72 19 -27.6 NP_203326 5' arm      3' arm
11369 - 45902 89 20 -27.2 NP_203361 5' arm      3' arm
11353 + 97691 88 21.5 -27.1 NP_203403 5' arm      3' arm
11368 - 37925 87 23.5 -27.1 5' arm      3' arm
11332 + 44042 90 19 -26.7 5' arm      3' arm
11387 - 68769 90 30.5 -26.14 5' arm      3' arm
11328 + 40887 90 20 -26 NP_203355 5' arm      3' arm
11348 + 81732 90 22.5 -26 NP_203394 5' arm      3' arm
11340 + 63068 90 19 -25.9 NP_203376 5' arm      3' arm
11394 - 81924 89 22.5 -25.7 NP_203394 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.