miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11340	+	63068	90	19	-25.9	NP_203376		5' arm      3' arm
11332	+	44042	90	19	-26.7			5' arm      3' arm
11367	-	32018	87	19	-21.4	NP_203339		5' arm      3' arm
11341	+	64337	89	19	-21.7	NP_203377		5' arm      3' arm
11358	-	2188	88	19	-21.4			5' arm      3' arm
11385	-	67757	90	19	-21.1	NP_203380		5' arm      3' arm
11317	+	17507	72	19	-27.6	NP_203326		5' arm      3' arm
11346	+	76981	89	19.5	-22.5	NP_203391		5' arm      3' arm
11375	-	54032	87	19.5	-23.1	NP_203369		5' arm      3' arm
11402	-	103073	90	19.5	-19.8	NP_203408		5' arm      3' arm
11376	-	55081	88	19.5	-23.7			5' arm      3' arm
11388	-	69750	90	19.5	-24.8	NP_203384		5' arm      3' arm
11326	+	39653	85	19.5	-28.3	NP_203351		5' arm      3' arm
11325	+	37852	89	19.5	-29.41			5' arm      3' arm
11324	+	37631	87	19.5	-19.4	NP_203348		5' arm      3' arm
11363	-	13682	90	19.5	-20.3	NP_203319		5' arm      3' arm
11316	+	14551	90	19.5	-23.2	NP_203321		5' arm      3' arm
11343	+	70035	90	19.5	-19.5	NP_203384		5' arm      3' arm
11380	-	63155	90	19.5	-23	NP_203376		5' arm      3' arm
11374	-	49734	90	19.5	-21.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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