miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
14010734 NC_002766.1 Beet chlorosis virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
10683 + 1108 90 22 -19.4 NP_114361 5' arm      3' arm
10684 - 2144 89 19.5 -21.3 NP_114361 5' arm      3' arm
10685 - 3429 89 21 -21.9 NP_114361 5' arm      3' arm
10686 - 4281 88 21.5 -26.3 NP_114364 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.