miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9626436 NC_001430.1 Human enterovirus D

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2444 + 2562 90 24 -21.4 NP_040760 5' arm      3' arm
2443 + 300 89 22.5 -25.7 5' arm      3' arm
2446 - 5418 88 21 -23.3 NP_040760 5' arm      3' arm
2445 - 1813 88 22.5 -19.7 NP_040760 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.