miRNA display CGI


Results 1 - 16 of 16 are showing below:
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GenBank Identifier RefSeq Acc. Name
22681117 NC_004136.1 Epinephelus tauvina nervous necrosis virus RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16603 + 562 90 21.5 -25.6 NP_689432 5' arm      3' arm
16604 + 998 88 19.5 -25.2 5' arm      3' arm
16605 + 1226 90 23 -23.8 5' arm      3' arm
16606 - 309 86 24 -24.8 NP_689432 5' arm      3' arm
16607 - 495 90 22.5 -25.9 NP_689432 5' arm      3' arm
16608 - 837 88 20 -23.5 NP_689432 5' arm      3' arm
16609 + 572 89 21 -25.4 NP_689433 5' arm      3' arm
16610 + 811 88 22 -21 NP_689433 5' arm      3' arm
16611 + 929 88 19.5 -23.7 NP_689433 5' arm      3' arm
16612 + 1138 89 21 -24.7 NP_689433 5' arm      3' arm
16613 + 2482 90 22.5 -20.7 NP_689433 5' arm      3' arm
16614 + 2901 89 19.5 -25.8 NP_689434 5' arm      3' arm
16615 - 327 90 19.5 -25.3 NP_689433 5' arm      3' arm
16616 - 660 89 19.5 -23.2 NP_689433 5' arm      3' arm
16617 - 1603 89 20 -21.5 NP_689433 5' arm      3' arm
16618 - 1789 86 25 -24.4 NP_689433 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.