miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
15148076 NC_003054.1 Goose circovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11253 - 96 89 20.5 -20.3 NP_150367 5' arm      3' arm
11252 + 1662 90 21 -24.4 NP_150370 5' arm      3' arm
11254 - 450 89 21 -20.9 NP_150368 5' arm      3' arm
11251 + 491 88 24 -20.3 NP_150368 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.