miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
27881469 NC_004541.1 Walrus calicivirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17674 + 87 88 20.5 -37.1 NP_777370 5' arm      3' arm
17679 - 1409 88 24.5 -31.9 NP_777370 5' arm      3' arm
17681 - 4055 78 19 -31.1 NP_777370 5' arm      3' arm
17675 + 2954 88 20.5 -30.4 NP_777370 5' arm      3' arm
17680 - 1820 90 23 -29.4 NP_777370 5' arm      3' arm
17678 - 194 88 21.5 -27.4 NP_777370 5' arm      3' arm
17676 + 3873 90 27 -24.3 NP_777370 5' arm      3' arm
17682 - 4338 89 23.5 -21.9 NP_777370 5' arm      3' arm
17677 + 6035 88 21 -21.7 NP_777371 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.