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GenBank Identifier | RefSeq Acc. | Name |
77999988 | NC_007501.1 | Bacteriophage Lc-Nu |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
33179 | + | 8634 | 90 | 19.5 | -20.9 | YP_358771 | 5' arm 3' arm | ||
33180 | + | 10719 | 89 | 22 | -20.76 | YP_358771 | 5' arm 3' arm | ||
33182 | + | 16976 | 87 | 20.5 | -24.02 | YP_358773 | 5' arm 3' arm | ||
33181 | + | 16768 | 90 | 20 | -21.6 | YP_358773 | 5' arm 3' arm | ||
33183 | + | 19723 | 90 | 19 | -22.8 | YP_358779 | 5' arm 3' arm | ||
33184 | + | 30160 | 88 | 22 | -21.2 | YP_358799 | 5' arm 3' arm | ||
33185 | + | 32311 | 85 | 19.5 | -23.9 | 5' arm 3' arm | |||
33186 | - | 14310 | 79 | 19.5 | -20.4 | YP_358772 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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