miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21001	-	1806	88	28	-20.4			5' arm      3' arm
20994	+	79829	88	19	-20.1	NP_835679		5' arm      3' arm
20995	+	84656	90	19.5	-21.2	NP_835685		5' arm      3' arm
20996	+	116772	89	23	-19.5	NP_835715		5' arm      3' arm
20998	+	125907	89	22.5	-20.4	NP_835728		5' arm      3' arm
20997	+	123022	90	20	-23	NP_835725		5' arm      3' arm
20999	+	126730	90	21	-20.9	NP_835728		5' arm      3' arm
21028	-	126982	90	21.5	-21.3	NP_835728		5' arm      3' arm
21026	-	125904	86	20.5	-23.9	NP_835728		5' arm      3' arm
20993	+	72598	90	21.5	-21.8	NP_835670		5' arm      3' arm
20992	+	45469	84	19	-27.7	NP_835645		5' arm      3' arm
20988	+	38636	85	22.5	-25.82	NP_835629		5' arm      3' arm
20983	+	15569	86	21.5	-19.7	NP_835605		5' arm      3' arm
20984	+	25677	89	19.5	-19.6			5' arm      3' arm
20985	+	28951	89	21	-34.54	NP_835619		5' arm      3' arm
20986	+	34063	88	21.5	-25.8	NP_835625		5' arm      3' arm
20991	+	40185	89	25	-21.6			5' arm      3' arm
20990	+	39835	90	24.5	-26.9	NP_835631		5' arm      3' arm
20987	+	38524	90	23.5	-26.9	NP_835629		5' arm      3' arm
20989	+	39022	90	23.5	-24.9	NP_835630		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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