miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
20992	+	45469	84	19	-27.7	NP_835645		5' arm      3' arm
21008	-	37937	90	19	-27	NP_835627		5' arm      3' arm
20994	+	79829	88	19	-20.1	NP_835679		5' arm      3' arm
21015	-	73460	86	19	-25.6	NP_835670		5' arm      3' arm
21027	-	126861	90	19	-21.5	NP_835728		5' arm      3' arm
21020	-	90070	89	19.5	-22.7	NP_835689		5' arm      3' arm
21010	-	40527	85	19.5	-26.8	NP_835632		5' arm      3' arm
21003	-	11976	88	19.5	-26.8			5' arm      3' arm
21029	-	127455	87	19.5	-30.4	NP_835729		5' arm      3' arm
21018	-	84745	90	19.5	-23.2	NP_835685		5' arm      3' arm
20984	+	25677	89	19.5	-19.6			5' arm      3' arm
20995	+	84656	90	19.5	-21.2	NP_835685		5' arm      3' arm
21021	-	92512	89	20	-22.3	NP_835691		5' arm      3' arm
20997	+	123022	90	20	-23	NP_835725		5' arm      3' arm
21005	-	25744	88	20	-22.1			5' arm      3' arm
21006	-	27419	90	20	-23	NP_835619		5' arm      3' arm
21002	-	10432	89	20	-22.2	NP_835600		5' arm      3' arm
21026	-	125904	86	20.5	-23.9	NP_835728		5' arm      3' arm
21025	-	125763	90	20.5	-31.1	NP_835728		5' arm      3' arm
21017	-	83294	90	21	-24.9	NP_835684		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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