miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21002	-	10432	89	20	-22.2	NP_835600		5' arm      3' arm
21003	-	11976	88	19.5	-26.8			5' arm      3' arm
21004	-	13699	85	23.5	-20.1	NP_835602		5' arm      3' arm
21005	-	25744	88	20	-22.1			5' arm      3' arm
21006	-	27419	90	20	-23	NP_835619		5' arm      3' arm
21007	-	29004	84	21	-22.6	NP_835619		5' arm      3' arm
21008	-	37937	90	19	-27	NP_835627		5' arm      3' arm
21009	-	39007	85	23	-29.7	NP_835630		5' arm      3' arm
21010	-	40527	85	19.5	-26.8	NP_835632		5' arm      3' arm
21011	-	44726	90	22	-22.7	NP_835644		5' arm      3' arm
21012	-	45238	90	22	-22.5	NP_835645		5' arm      3' arm
21013	-	48758	90	21.5	-21.2	NP_835648		5' arm      3' arm
21014	-	72470	90	22.5	-23.7			5' arm      3' arm
21015	-	73460	86	19	-25.6	NP_835670		5' arm      3' arm
21016	-	83114	90	21.5	-29.7	NP_835684		5' arm      3' arm
21017	-	83294	90	21	-24.9	NP_835684		5' arm      3' arm
21018	-	84745	90	19.5	-23.2	NP_835685		5' arm      3' arm
21019	-	84873	87	21	-24.1	NP_835685		5' arm      3' arm
21020	-	90070	89	19.5	-22.7	NP_835689		5' arm      3' arm
21021	-	92512	89	20	-22.3	NP_835691		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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