miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9629345 NC_001800.1 Garlic virus X

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
5523 - 282 89 22 -20.2 NP_044571 5' arm      3' arm
5524 - 2908 88 24 -20.3 NP_044571 5' arm      3' arm
5525 - 7241 86 19.5 -21.2 NP_044575 5' arm      3' arm
5526 - 7845 89 21 -20.2 NP_044576 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.