miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13079	-	42641	88	20	-36	NP_570379		5' arm      3' arm
13020	+	9334	89	20.5	-30.6	NP_570322		5' arm      3' arm
13070	-	27170	88	20	-29.6	NP_570349		5' arm      3' arm
13029	+	21837	90	19.5	-29.1	NP_570342		5' arm      3' arm
13072	-	29251	85	21	-28.5	NP_570351		5' arm      3' arm
13041	+	34017	89	19	-28			5' arm      3' arm
13068	-	24449	90	23.5	-28	NP_570344		5' arm      3' arm
13060	-	9595	88	20.5	-27.6	NP_570322		5' arm      3' arm
13018	+	7733	89	22.5	-27.2	NP_570320		5' arm      3' arm
13051	-	1141	84	21.5	-27	NP_570313		5' arm      3' arm
13014	+	5612	83	19	-27	NP_570317		5' arm      3' arm
13057	-	7183	90	24	-26.6	NP_570319		5' arm      3' arm
13076	-	37881	90	24	-25.9	NP_570367		5' arm      3' arm
13058	-	7460	87	20	-25.82			5' arm      3' arm
13048	+	44225	90	20	-25.8	NP_570385		5' arm      3' arm
13082	-	44187	89	19.5	-25.4	NP_570384		5' arm      3' arm
13024	+	14044	89	20	-25	NP_570330		5' arm      3' arm
13019	+	9075	88	21.5	-24.8	NP_570322		5' arm      3' arm
13037	+	29437	90	25.5	-24.7	NP_570352		5' arm      3' arm
13067	-	21790	90	19	-24.7	NP_570342		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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