miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13030	+	22559	88	21	-21.9	NP_570343		5' arm      3' arm
13014	+	5612	83	19	-27	NP_570317		5' arm      3' arm
13021	+	9866	90	24	-22.7	NP_570322		5' arm      3' arm
13022	+	10188	89	20	-22.7	NP_570322		5' arm      3' arm
13023	+	11125	86	19	-20.5	NP_570324		5' arm      3' arm
13026	+	15782	89	22	-21.6			5' arm      3' arm
13024	+	14044	89	20	-25	NP_570330		5' arm      3' arm
13025	+	15085	89	19.5	-20.1	NP_570330		5' arm      3' arm
13031	+	22885	90	21.5	-22.4	NP_570344		5' arm      3' arm
13015	+	6702	89	20	-20.5	NP_570319		5' arm      3' arm
13020	+	9334	89	20.5	-30.6	NP_570322		5' arm      3' arm
13016	+	6987	90	21	-19.9	NP_570319		5' arm      3' arm
13011	+	3715	89	21	-20.2	NP_570316		5' arm      3' arm
13008	+	844	88	20	-19.4			5' arm      3' arm
13012	+	3827	83	19.5	-21.8	NP_570316		5' arm      3' arm
13009	+	2483	84	19	-21.9			5' arm      3' arm
13010	+	3472	89	19	-22.2	NP_570316		5' arm      3' arm
13017	+	7372	89	22.5	-22.1			5' arm      3' arm
13018	+	7733	89	22.5	-27.2	NP_570320		5' arm      3' arm
13019	+	9075	88	21.5	-24.8	NP_570322		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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