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GenBank Identifier | RefSeq Acc. | Name |
13559823 | NC_002730.1 | Bacteriophage HK620 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
10663 | + | 1180 | 90 | 21.5 | -20.3 | 5' arm 3' arm | |||
10664 | + | 6309 | 79 | 22 | -23.7 | 5' arm 3' arm | |||
10665 | + | 7656 | 90 | 21.5 | -23.9 | 5' arm 3' arm | |||
10666 | + | 9285 | 90 | 20 | -19.4 | NP_112054 | 5' arm 3' arm | ||
10667 | + | 11428 | 89 | 22 | -26.7 | NP_112058 | 5' arm 3' arm | ||
10668 | + | 18021 | 90 | 21 | -21.4 | 5' arm 3' arm | |||
10669 | + | 19100 | 90 | 19.5 | -26.6 | 5' arm 3' arm | |||
10670 | + | 20173 | 87 | 21 | -20.3 | NP_112076 | 5' arm 3' arm | ||
10671 | + | 29622 | 90 | 21.5 | -20.6 | NP_112085 | 5' arm 3' arm | ||
10672 | + | 32194 | 90 | 19.5 | -25 | NP_112087 | 5' arm 3' arm | ||
10673 | + | 33842 | 90 | 22.5 | -20.3 | NP_112089 | 5' arm 3' arm | ||
10674 | - | 4460 | 79 | 19.5 | -24.1 | NP_112043 | 5' arm 3' arm | ||
10675 | - | 6385 | 72 | 19.5 | -25 | 5' arm 3' arm | |||
10676 | - | 7744 | 88 | 21.5 | -29.5 | 5' arm 3' arm | |||
10677 | - | 11851 | 90 | 21.5 | -20.5 | NP_112058 | 5' arm 3' arm | ||
10678 | - | 14980 | 87 | 19 | -21.2 | NP_112067 | 5' arm 3' arm | ||
10679 | - | 15742 | 85 | 24.5 | -21.6 | 5' arm 3' arm | |||
10680 | - | 17769 | 89 | 21.5 | -24 | NP_112070 | 5' arm 3' arm | ||
10681 | - | 27289 | 84 | 20 | -24.23 | NP_112082 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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