miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20178630 NC_003677.1 Pestivirus Reindeer-1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14943 + 2793 82 23.5 -30.8 NP_620051 5' arm      3' arm
14944 + 6094 87 20 -21.9 NP_620051 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.