miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
32469420 NC_004996.1 Streptococcus mitis phage SM1 provirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22205 + 19718 90 20.5 -22.1 NP_862877 5' arm      3' arm
22206 + 22419 84 19.5 -20.9 NP_862881 5' arm      3' arm
22207 + 33455 89 23 -25.8 NP_862895 5' arm      3' arm
22208 - 24144 90 25.5 -22.8 NP_862886 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.