miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
66478128 NC_007017.1 Pelargonium line pattern virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32231 + 44 90 20 -26.1 YP_238476 5' arm      3' arm
32232 + 892 87 21.5 -23.2 YP_238475 5' arm      3' arm
32233 + 1704 89 21.5 -32.5 YP_238475 5' arm      3' arm
32234 + 2100 88 19 -22.4 5' arm      3' arm
32235 + 2736 90 21.5 -30.4 YP_238481 5' arm      3' arm
32236 + 3236 90 21 -27.1 YP_238481 5' arm      3' arm
32237 + 3501 89 22 -27.02 YP_238481 5' arm      3' arm
32238 - 432 90 21.5 -24.34 YP_238475 5' arm      3' arm
32239 - 3396 89 20.5 -24.1 YP_238481 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.