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GenBank Identifier | RefSeq Acc. | Name |
23578028 | NC_004322.1 | Tulip virus X |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
16957 | - | 259 | 90 | 22.5 | -23.4 | NP_702988 | 5' arm 3' arm | ||
16958 | - | 1396 | 90 | 20 | -26.1 | 5' arm 3' arm | |||
16959 | - | 1612 | 89 | 19.5 | -19.4 | NP_702988 | 5' arm 3' arm | ||
16960 | - | 2033 | 74 | 19.5 | -22.9 | NP_702988 | 5' arm 3' arm | ||
16961 | - | 2161 | 90 | 22 | -24 | NP_702988 | 5' arm 3' arm | ||
16962 | - | 2880 | 87 | 19 | -24.2 | NP_702988 | 5' arm 3' arm | ||
16963 | - | 2987 | 90 | 26 | -21.6 | NP_702988 | 5' arm 3' arm | ||
16964 | - | 3721 | 85 | 22.5 | -30.1 | NP_702988 | 5' arm 3' arm | ||
16965 | - | 4761 | 90 | 22 | -22.4 | NP_702989 | 5' arm 3' arm | ||
16966 | - | 5704 | 89 | 20 | -20.4 | NP_702992 | 5' arm 3' arm | ||
16967 | - | 5809 | 89 | 19.5 | -20.7 | NP_702992 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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