Results 1 - 12 of 12 are showing below:
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GenBank Identifier | RefSeq Acc. | Name |
30018236 | NC_004724.1 | Grapevine rootstock stem lesion associated virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
20958 | + | 725 | 79 | 20.5 | -22.8 | NP_835244 | 5' arm 3' arm | ||
20959 | + | 1477 | 89 | 21.5 | -23.1 | NP_835244 | 5' arm 3' arm | ||
20960 | + | 4275 | 90 | 22.5 | -21.1 | NP_835244 | 5' arm 3' arm | ||
20961 | + | 5029 | 90 | 26 | -20.5 | NP_835244 | 5' arm 3' arm | ||
20962 | + | 5749 | 86 | 19 | -21.8 | NP_835244 | 5' arm 3' arm | ||
20963 | + | 7051 | 90 | 19 | -27.5 | NP_835244 | 5' arm 3' arm | ||
20964 | + | 10205 | 89 | 20.5 | -19.7 | NP_835244 | 5' arm 3' arm | ||
20965 | + | 11689 | 89 | 21.5 | -23.1 | NP_835247 | 5' arm 3' arm | ||
20966 | + | 11988 | 88 | 19.5 | -24.5 | NP_835247 | 5' arm 3' arm | ||
20967 | - | 983 | 86 | 20.5 | -22.17 | NP_835244 | 5' arm 3' arm | ||
20968 | - | 1255 | 90 | 19 | -22.5 | NP_835244 | 5' arm 3' arm | ||
20969 | - | 15914 | 90 | 21.5 | -23.2 | NP_835252 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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