miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
30018236 NC_004724.1 Grapevine rootstock stem lesion associated virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
20958 + 725 79 20.5 -22.8 NP_835244 5' arm      3' arm
20959 + 1477 89 21.5 -23.1 NP_835244 5' arm      3' arm
20960 + 4275 90 22.5 -21.1 NP_835244 5' arm      3' arm
20961 + 5029 90 26 -20.5 NP_835244 5' arm      3' arm
20962 + 5749 86 19 -21.8 NP_835244 5' arm      3' arm
20963 + 7051 90 19 -27.5 NP_835244 5' arm      3' arm
20964 + 10205 89 20.5 -19.7 NP_835244 5' arm      3' arm
20965 + 11689 89 21.5 -23.1 NP_835247 5' arm      3' arm
20966 + 11988 88 19.5 -24.5 NP_835247 5' arm      3' arm
20967 - 983 86 20.5 -22.17 NP_835244 5' arm      3' arm
20968 - 1255 90 19 -22.5 NP_835244 5' arm      3' arm
20969 - 15914 90 21.5 -23.2 NP_835252 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.