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| GenBank Identifier | RefSeq Acc. | Name |
| 33300801 | NC_005048.1 | Chilli leaf curl disease associated sequence virion |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 22383 | + | 443 | 89 | 20 | -21.8 | NP_877490 | 5' arm 3' arm | ||
| 22384 | + | 1273 | 89 | 19 | -23 | 5' arm 3' arm | |||
| 22385 | - | 531 | 90 | 22.5 | -22.7 | NP_877490 | 5' arm 3' arm | ||
| 22386 | - | 1361 | 89 | 20 | -22.4 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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