miRNA display CGI


Results 1 - 16 of 16 are showing below:
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GenBank Identifier RefSeq Acc. Name
15741225 NC_003113.1 Perina nuda picorna-like virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11706 + 1356 87 23 -22.36 NP_277061 5' arm      3' arm
11707 + 1881 86 20 -19.8 NP_277061 5' arm      3' arm
11708 + 1992 87 22 -24.7 NP_277061 5' arm      3' arm
11709 + 2203 90 26.5 -25.7 NP_277061 5' arm      3' arm
11710 + 2714 90 28 -25.9 NP_277061 5' arm      3' arm
11711 + 2984 90 24 -22.8 NP_277061 5' arm      3' arm
11712 + 3077 88 21 -33.6 NP_277061 5' arm      3' arm
11713 + 3880 89 25.5 -30.8 NP_277061 5' arm      3' arm
11714 + 5084 90 20.5 -25.4 NP_277061 5' arm      3' arm
11715 + 5804 90 20 -22.8 NP_277061 5' arm      3' arm
11716 + 6752 90 25.5 -22.9 NP_277061 5' arm      3' arm
11717 - 1971 88 19 -26.2 NP_277061 5' arm      3' arm
11718 - 2078 89 21.5 -26.6 NP_277061 5' arm      3' arm
11719 - 2213 83 20.5 -23.69 NP_277061 5' arm      3' arm
11720 - 2516 90 23.5 -19.5 NP_277061 5' arm      3' arm
11721 - 4063 87 23 -26.6 NP_277061 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.