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GenBank Identifier | RefSeq Acc. | Name |
33770508 | NC_005069.1 | Bacteriophage PY54 virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22494 | + | 8756 | 85 | 20.5 | -27.5 | NP_892058 | 5' arm 3' arm | ||
22495 | + | 9407 | 90 | 21.5 | -26.9 | 5' arm 3' arm | |||
22496 | + | 17960 | 88 | 19.5 | -27.3 | NP_892069 | 5' arm 3' arm | ||
22497 | + | 18272 | 90 | 21.5 | -22.6 | NP_892069 | 5' arm 3' arm | ||
22498 | + | 30299 | 88 | 19 | -25.2 | NP_892081 | 5' arm 3' arm | ||
22499 | - | 19246 | 89 | 20 | -20.3 | NP_892070 | 5' arm 3' arm | ||
22500 | - | 27930 | 89 | 20 | -22.4 | NP_892081 | 5' arm 3' arm | ||
22501 | - | 41184 | 87 | 21.5 | -23.3 | 5' arm 3' arm | |||
22502 | - | 42680 | 78 | 19.5 | -24.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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