miRNA display CGI


Results 1 - 15 of 15 are showing below:
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GenBank Identifier RefSeq Acc. Name
24371534 NC_004348.1 Salmonella typhimurium bacteriophage ST64T virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17224 + 22080 90 21.5 -23.2 NP_720321 5' arm      3' arm
17225 + 25850 90 20.5 -21.3 NP_720327 5' arm      3' arm
17226 + 29371 90 19.5 -22.1 NP_720329 5' arm      3' arm
17227 + 30112 89 20 -20.3 NP_720329 5' arm      3' arm
17228 + 32127 87 21 -20.59 NP_720332 5' arm      3' arm
17229 + 34481 83 19.5 -24.3 NP_720336 5' arm      3' arm
17230 + 36086 90 19.5 -22.3 NP_720337 5' arm      3' arm
17231 + 36375 87 21 -22.9 NP_720337 5' arm      3' arm
17232 - 9037 85 22 -23.4 NP_720289 5' arm      3' arm
17233 - 26874 88 19.5 -20.8 NP_720327 5' arm      3' arm
17234 - 27065 87 20 -20.2 NP_720327 5' arm      3' arm
17235 - 29731 90 25.5 -22.6 NP_720329 5' arm      3' arm
17236 - 31114 90 20 -20.4 NP_720331 5' arm      3' arm
17237 - 34745 88 19 -23.8 NP_720336 5' arm      3' arm
17238 - 36097 89 21.5 -19.8 NP_720337 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.