miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
18034800 NC_003157.4 Temperate phage PhiNIH1.1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11725 + 31658 81 22 -25.6 NP_438157 5' arm      3' arm
11724 + 31475 89 21 -24.5 NP_438156 5' arm      3' arm
11723 + 12058 85 20.5 -20 5' arm      3' arm
11722 + 6985 89 21.5 -21 NP_438123 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.