miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
31343652 NC_002628.2 Methanothermobacter wolfeii prophage psiM100

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
9848 + 13541 85 23 -27.9 NP_071820 5' arm      3' arm
9850 + 17127 88 19 -27 NP_071825 5' arm      3' arm
9849 + 15260 90 19 -26.8 NP_071822 5' arm      3' arm
9853 - 2122 88 21.5 -26.2 NP_071805 5' arm      3' arm
9858 - 23296 89 21 -25.9 NP_071831 5' arm      3' arm
9851 + 24311 88 23 -25.4 NP_071832 5' arm      3' arm
9852 + 26385 86 22.5 -25.2 NP_071835 5' arm      3' arm
9859 - 23924 90 20.5 -23.5 NP_071832 5' arm      3' arm
9855 - 5391 90 30 -23.3 5' arm      3' arm
9854 - 5266 90 30 -23.3 5' arm      3' arm
9857 - 14245 90 21 -22 NP_071821 5' arm      3' arm
9856 - 13128 85 22.5 -21.4 NP_071819 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.