miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
20514400 NC_003791.1 Cycas necrotic stunt virus RNA 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15190 + 488 89 22.5 -20.8 NP_620619 5' arm      3' arm
15191 + 1224 88 21 -20.7 NP_620619 5' arm      3' arm
15192 + 2925 89 19.5 -22.9 NP_620619 5' arm      3' arm
15193 + 3965 89 19 -21.1 NP_620619 5' arm      3' arm
15194 - 741 77 19.5 -26 NP_620619 5' arm      3' arm
15195 - 962 75 20.5 -24.92 NP_620619 5' arm      3' arm
15196 + 867 88 23 -20.42 NP_620620 5' arm      3' arm
15197 + 1126 90 23.5 -23.22 NP_620620 5' arm      3' arm
15198 + 1794 89 20 -22.5 NP_620620 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.