miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
378	+	34597	89	26.5	-24.6	AP_000333		5' arm      3' arm
377	+	33785	86	19.5	-21.9	AP_000332		5' arm      3' arm
376	+	32326	83	19.5	-23	AP_000330		5' arm      3' arm
375	+	27823	88	21.5	-20.4	AP_000321		5' arm      3' arm
422	-	27190	80	19.5	-20.4	AP_000320		5' arm      3' arm
420	-	26613	90	21.5	-23.2	AP_000319		5' arm      3' arm
421	-	26742	86	19.5	-19.9	AP_000319		5' arm      3' arm
419	-	26077	89	24.5	-19.9	AP_000318		5' arm      3' arm
414	-	23480	90	22.5	-22	AP_000316		5' arm      3' arm
418	-	25572	90	22	-24.8	AP_000316		5' arm      3' arm
416	-	25156	83	20	-29	AP_000316		5' arm      3' arm
373	+	24155	90	20	-25.64	AP_000316		5' arm      3' arm
372	+	23664	81	20	-23	AP_000316		5' arm      3' arm
374	+	24400	87	20.5	-27.1	AP_000316		5' arm      3' arm
417	-	25344	86	19.5	-24.11	AP_000316		5' arm      3' arm
415	-	24252	89	20	-20.3	AP_000316		5' arm      3' arm
371	+	23310	81	19	-25.2	AP_000315		5' arm      3' arm
370	+	23209	88	22	-27.7	AP_000315		5' arm      3' arm
369	+	23059	90	27	-30.7	AP_000315		5' arm      3' arm
412	-	22693	87	20	-31.2	AP_000315		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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