miRNA display CGI


Results 1 - 20 of 83 are showing below:
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GenBank Identifier RefSeq Acc. Name
56160634 AC_000011.1 Simian adenovirus 25

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
369 + 23059 90 27 -30.7 AP_000315 5' arm      3' arm
378 + 34597 89 26.5 -24.6 AP_000333 5' arm      3' arm
424 - 36446 89 25.5 -24.3 5' arm      3' arm
419 - 26077 89 24.5 -19.9 AP_000318 5' arm      3' arm
380 - 2097 90 24.5 -22.6 AP_000301 5' arm      3' arm
351 + 6130 90 24 -23.4 AP_000304 5' arm      3' arm
388 - 12375 89 24 -22.3 AP_000307 5' arm      3' arm
406 - 20844 88 23 -21.5 AP_000313 5' arm      3' arm
400 - 17050 90 23 -24 AP_000310 5' arm      3' arm
423 - 36195 89 23 -21.9 5' arm      3' arm
344 + 3476 90 22.5 -23 AP_000302 5' arm      3' arm
408 - 21167 87 22.5 -27.4 5' arm      3' arm
367 + 22377 90 22.5 -22.5 AP_000315 5' arm      3' arm
414 - 23480 90 22.5 -22 AP_000316 5' arm      3' arm
370 + 23209 88 22 -27.7 AP_000315 5' arm      3' arm
397 - 16550 88 22 -21.8 AP_000310 5' arm      3' arm
418 - 25572 90 22 -24.8 AP_000316 5' arm      3' arm
358 + 11556 90 22 -22 AP_000306 5' arm      3' arm
398 - 16830 89 22 -20.2 AP_000310 5' arm      3' arm
420 - 26613 90 21.5 -23.2 AP_000319 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.