miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
383	-	9112	89	20	-22.6	AP_000305		5' arm      3' arm
382	-	8849	90	19	-25.6	AP_000305		5' arm      3' arm
356	+	9705	90	19.5	-25.6	AP_000305		5' arm      3' arm
357	+	10163	89	20.5	-31.9	AP_000305		5' arm      3' arm
384	-	11108	90	19.5	-20.6	AP_000306		5' arm      3' arm
385	-	11565	88	20	-29.6	AP_000306		5' arm      3' arm
359	+	11724	87	19	-23.6	AP_000306		5' arm      3' arm
358	+	11556	90	22	-22	AP_000306		5' arm      3' arm
360	+	12048	88	20	-22.8	AP_000307		5' arm      3' arm
389	-	12535	86	21.5	-19.8	AP_000307		5' arm      3' arm
393	-	13270	89	20	-30.5	AP_000307		5' arm      3' arm
388	-	12375	89	24	-22.3	AP_000307		5' arm      3' arm
391	-	12964	89	21.5	-19.9	AP_000307		5' arm      3' arm
390	-	12794	89	21.5	-29.6	AP_000307		5' arm      3' arm
386	-	12156	90	21.5	-19.8	AP_000307		5' arm      3' arm
361	+	12205	87	19.5	-20.4	AP_000307		5' arm      3' arm
392	-	13117	90	21	-26.7	AP_000307		5' arm      3' arm
363	+	13184	89	19.5	-24.8	AP_000307		5' arm      3' arm
362	+	12967	90	19.5	-27.8	AP_000307		5' arm      3' arm
387	-	12286	86	19	-20.2	AP_000307		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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